Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.92■□□□□ 0.94
SYCE3A1L190 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.92■□□□□ 0.94
SYCE3A1L190 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.92■□□□□ 0.94
SYCE3A1L190 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.92■□□□□ 0.94
SYCE3A1L190 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.92■□□□□ 0.94
SYCE3A1L190 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.92■□□□□ 0.94
SYCE3A1L190 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.92■□□□□ 0.94
SYCE3A1L190 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.92■□□□□ 0.94
SYCE3A1L190 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.92■□□□□ 0.94
SYCE3A1L190 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.92■□□□□ 0.94
SYCE3A1L190 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.92■□□□□ 0.94
SYCE3A1L190 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SYCE3A1L190 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.92■□□□□ 0.94
SYCE3A1L190 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
SYCE3A1L190 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYCE3A1L190 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SYCE3A1L190 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.91■□□□□ 0.94
SYCE3A1L190 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SYCE3A1L190 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.91■□□□□ 0.94
SYCE3A1L190 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.91■□□□□ 0.94
SYCE3A1L190 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.91■□□□□ 0.94
SYCE3A1L190 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYCE3A1L190 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SYCE3A1L190 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SYCE3A1L190 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.9■□□□□ 0.94
SYCE3A1L190 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.9■□□□□ 0.94
SYCE3A1L190 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SYCE3A1L190 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.9■□□□□ 0.94
SYCE3A1L190 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.9■□□□□ 0.94
SYCE3A1L190 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYCE3A1L190 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYCE3A1L190 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SYCE3A1L190 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SYCE3A1L190 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SYCE3A1L190 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.89■□□□□ 0.94
SYCE3A1L190 NBPF21P-201ENST00000425093 1451 ntBASIC20.89■□□□□ 0.94
SYCE3A1L190 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SYCE3A1L190 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.89■□□□□ 0.93
SYCE3A1L190 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.89■□□□□ 0.93
SYCE3A1L190 CROCCP5-201ENST00000436658 830 ntBASIC20.89■□□□□ 0.93
SYCE3A1L190 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.89■□□□□ 0.93
SYCE3A1L190 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.89■□□□□ 0.93
SYCE3A1L190 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.89■□□□□ 0.93
SYCE3A1L190 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SYCE3A1L190 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 AL023806.1-201ENST00000603994 1649 ntBASIC20.89■□□□□ 0.93
SYCE3A1L190 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYCE3A1L190 GMCL1P1-201ENST00000463439 1581 ntBASIC20.89■□□□□ 0.93
SYCE3A1L190 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SYCE3A1L190 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms