Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 HTR7P1-201ENST00000538670 1336 ntBASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV5A0A0B4J249 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 KRT17P3-201ENST00000420566 1262 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AC004980.1-204ENST00000429707 299 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 KRT16P5-201ENST00000455284 522 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AC091390.4-202ENST00000476426 537 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AC069544.1-201ENST00000609399 999 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 PCDHA12-202ENST00000613593 2588 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 AL445675.2-201ENST00000620291 557 ntBASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV5A0A0B4J249 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 AC012317.2-201ENST00000623305 2251 ntBASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 AL096828.2-201ENST00000567259 1965 ntBASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 FLJ13224-201ENST00000313737 1514 ntBASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.27□□□□□ -0.12
TRAV5A0A0B4J249 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV5A0A0B4J249 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC080080.1-201ENST00000625121 2420 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms