Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL023803.3-201ENST00000615559 522 ntBASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 AC009102.3-201ENST00000623118 1491 ntBASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHA3Q9Y5H8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 AC099343.3-201ENST00000605834 2503 ntBASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 MIR149-201ENST00000384879 89 ntBASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 AL355355.2-201ENST00000442321 338 ntBASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 AL158047.1-201ENST00000445918 881 ntBASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHA3Q9Y5H8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
PCDHA3Q9Y5H8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 AC026471.5-201ENST00000615068 467 ntBASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHA3Q9Y5H8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 KRT8P7-201ENST00000533003 1432 ntBASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDHA3Q9Y5H8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHA3Q9Y5H8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHA3Q9Y5H8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHA3Q9Y5H8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHA3Q9Y5H8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms