Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AL390955.1-201ENST00000428694 934 ntBASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SLC25A6P5-201ENST00000435663 894 ntBASIC14.89□□□□□ -0.03
FOXA2Q9Y261 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 TSPY15P-201ENST00000457163 923 ntBASIC14.89□□□□□ -0.03
FOXA2Q9Y261 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.89□□□□□ -0.03
FOXA2Q9Y261 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FOXA2Q9Y261 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 AP000593.1-201ENST00000393668 712 ntBASIC14.88□□□□□ -0.03
FOXA2Q9Y261 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 CA15P1-201ENST00000481698 905 ntBASIC14.88□□□□□ -0.03
FOXA2Q9Y261 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FOXA2Q9Y261 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 SLC25A1P2-201ENST00000430693 912 ntBASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CCR12P-201ENST00000446203 998 ntBASIC14.87□□□□□ -0.03
FOXA2Q9Y261 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.87□□□□□ -0.03
FOXA2Q9Y261 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 NAPSB-206ENST00000562112 1266 ntBASIC14.87□□□□□ -0.03
FOXA2Q9Y261 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXA2Q9Y261 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXA2Q9Y261 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXA2Q9Y261 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms