Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SPG7Q9UQ90 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AC112777.1-201ENST00000540175 1423 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 IL9RP2-201ENST00000423948 1312 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 RCN1P2-201ENST00000398357 915 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AF186996.4-201ENST00000467186 377 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AC008608.2-201ENST00000606089 416 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AL024508.2-201ENST00000607749 1894 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 AL049812.1-201ENST00000432563 2267 ntBASIC23.95■■□□□ 1.42
SPG7Q9UQ90 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SPG7Q9UQ90 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 TP73-AS1-210ENST00000637775 1455 ntBASIC23.94■■□□□ 1.42
SPG7Q9UQ90 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 AL031284.1-201ENST00000419297 478 ntBASIC23.94■■□□□ 1.42
SPG7Q9UQ90 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 AF228730.7-201ENST00000641842 219 ntBASIC23.94■■□□□ 1.42
SPG7Q9UQ90 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SPG7Q9UQ90 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.93■■□□□ 1.42
SPG7Q9UQ90 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 AC009154.2-201ENST00000621177 724 ntBASIC23.92■■□□□ 1.42
SPG7Q9UQ90 AC148477.8-201ENST00000624298 468 ntBASIC23.92■■□□□ 1.42
SPG7Q9UQ90 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms