Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL138831.2-201ENST00000606564 490 ntBASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 PRKN-208ENST00000610470 531 ntTSL 2 BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 PRKN-209ENST00000612485 225 ntTSL 5 BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 MIR7706-201ENST00000613747 67 ntBASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 PAN3-AS1-201ENST00000563843 1351 ntBASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 AC093484.2-201ENST00000580996 2166 ntBASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CDK11AQ9UQ88 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 MTDHP3-201ENST00000594186 672 ntBASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 FAM215A-202ENST00000632077 792 ntBASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 INTS4P1-201ENST00000438455 1935 ntBASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDK11AQ9UQ88 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 LITAF-211ENST00000572255 516 ntTSL 4 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 MYLKP1-201ENST00000509077 1580 ntBASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDK11AQ9UQ88 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 MTCL1P1-201ENST00000446207 792 ntBASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AC011467.2-201ENST00000598425 242 ntBASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AP001269.4-201ENST00000609611 512 ntBASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.31■■■□□ 2.12
CDK11AQ9UQ88 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 RPS2P28-201ENST00000314255 741 ntBASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 AL049840.3-201ENST00000602669 611 ntBASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDK11AQ9UQ88 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms