Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 BAD-202ENST00000394531 631 ntTSL 3 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 AC015922.1-201ENST00000421102 1152 ntBASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 TEX21P-204ENST00000641479 1693 ntBASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 LINC01006-201ENST00000333319 2292 ntBASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC27.71■■■□□ 2.03
COL17A1Q9UMD9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 AC018845.2-201ENST00000568326 409 ntBASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL17A1Q9UMD9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC27.7■■■□□ 2.02
COL17A1Q9UMD9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 Z92544.3-201ENST00000624747 417 ntBASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.69■■■□□ 2.02
COL17A1Q9UMD9 AC097374.2-201ENST00000618617 1306 ntBASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 CEND1P1-201ENST00000451006 455 ntBASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 AP000867.4-201ENST00000641616 219 ntBASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 AC099778.1-201ENST00000568593 1911 ntBASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL17A1Q9UMD9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL17A1Q9UMD9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 GPR89P-201ENST00000407924 1495 ntBASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC27.66■■■□□ 2.02
COL17A1Q9UMD9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms