Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 HMGN1P19-201ENST00000436976 333 ntBASIC26.31■■□□□ 1.8
STAG3Q9UJ98 OR7E14P-202ENST00000530490 1290 ntBASIC26.31■■□□□ 1.8
STAG3Q9UJ98 AC034105.1-201ENST00000563488 319 ntBASIC26.31■■□□□ 1.8
STAG3Q9UJ98 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 PCDHAC2-203ENST00000615316 3011 ntBASIC26.31■■□□□ 1.8
STAG3Q9UJ98 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
STAG3Q9UJ98 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 ASL-204ENST00000395331 1538 ntTSL 5 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 NMU-202ENST00000505262 693 ntTSL 3 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC26.3■■□□□ 1.8
STAG3Q9UJ98 AC009102.3-201ENST00000623118 1491 ntBASIC26.3■■□□□ 1.8
STAG3Q9UJ98 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 NARF-204ENST00000390006 1766 ntTSL 2 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 RPSAP43-201ENST00000402237 625 ntBASIC26.29■■□□□ 1.8
STAG3Q9UJ98 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 ABCD1P5-201ENST00000445663 754 ntBASIC26.29■■□□□ 1.8
STAG3Q9UJ98 KRT18P3-201ENST00000451602 1288 ntBASIC26.29■■□□□ 1.8
STAG3Q9UJ98 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 PNMT-203ENST00000581428 677 ntTSL 2 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 AC011467.2-201ENST00000598425 242 ntBASIC26.29■■□□□ 1.8
STAG3Q9UJ98 AL138831.2-201ENST00000606564 490 ntBASIC26.29■■□□□ 1.8
STAG3Q9UJ98 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
STAG3Q9UJ98 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 RAB17-203ENST00000409576 466 ntTSL 3 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 PMS2P2-201ENST00000425039 1128 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 MTCL1P1-201ENST00000446207 792 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 RNA5SP415-201ENST00000517246 115 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 AC012640.2-201ENST00000561606 901 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 MIR3687-2-201ENST00000577708 61 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 Z83851.2-201ENST00000609564 659 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 MIR3687-1-201ENST00000614492 61 ntBASIC26.28■■□□□ 1.8
STAG3Q9UJ98 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
STAG3Q9UJ98 AL356309.3-201ENST00000624132 1934 ntBASIC26.27■■□□□ 1.8
STAG3Q9UJ98 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 GPX1P2-201ENST00000429271 606 ntBASIC26.27■■□□□ 1.8
STAG3Q9UJ98 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms