Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 KRT8P45-201ENST00000414328 1447 ntBASIC21.07■□□□□ 0.96
USP25Q9UHP3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 AC080080.1-201ENST00000625121 2420 ntBASIC21.07■□□□□ 0.96
USP25Q9UHP3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP25Q9UHP3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP25Q9UHP3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 SIRPAP1-201ENST00000448467 1770 ntBASIC21.06■□□□□ 0.96
USP25Q9UHP3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 KRT18P29-201ENST00000397031 1267 ntBASIC21.06■□□□□ 0.96
USP25Q9UHP3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 MESTP1-201ENST00000404287 994 ntBASIC21.06■□□□□ 0.96
USP25Q9UHP3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.06■□□□□ 0.96
USP25Q9UHP3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 AL357033.4-201ENST00000617703 1807 ntBASIC21.06■□□□□ 0.96
USP25Q9UHP3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP25Q9UHP3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.06■□□□□ 0.96
USP25Q9UHP3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.05■□□□□ 0.96
USP25Q9UHP3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP25Q9UHP3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 RCC2P3-201ENST00000418112 1537 ntBASIC21.04■□□□□ 0.96
USP25Q9UHP3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP25Q9UHP3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 SLC25A6P5-201ENST00000435663 894 ntBASIC21.04■□□□□ 0.96
USP25Q9UHP3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.04■□□□□ 0.96
USP25Q9UHP3 DGCR10-201ENST00000609839 495 ntBASIC21.04■□□□□ 0.96
USP25Q9UHP3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms