Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 ANO7L1-203ENST00000602586 1720 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 AC005082.1-201ENST00000413042 2259 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 AC009102.3-201ENST00000623118 1491 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 AC092329.2-201ENST00000598402 547 ntBASIC17.27■□□□□ 0.36
CTSFQ9UBX1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSFQ9UBX1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSFQ9UBX1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CTSFQ9UBX1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSFQ9UBX1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSFQ9UBX1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTSFQ9UBX1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 IGHGP-201ENST00000390555 1178 ntBASIC17.26■□□□□ 0.35
CTSFQ9UBX1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 MIR3180-1-201ENST00000580374 94 ntBASIC17.26■□□□□ 0.35
CTSFQ9UBX1 MIR3180-3-201ENST00000584616 94 ntBASIC17.26■□□□□ 0.35
CTSFQ9UBX1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 GPR32P1-201ENST00000601788 811 ntBASIC17.26■□□□□ 0.35
CTSFQ9UBX1 AC012313.10-201ENST00000623509 926 ntBASIC17.26■□□□□ 0.35
CTSFQ9UBX1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSFQ9UBX1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 SDHAP2-201ENST00000455183 2001 ntBASIC17.25■□□□□ 0.35
CTSFQ9UBX1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTSFQ9UBX1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 KRT18P1-202ENST00000452408 1331 ntBASIC17.24■□□□□ 0.35
CTSFQ9UBX1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.24■□□□□ 0.35
CTSFQ9UBX1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms