Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 AC018695.7-201ENST00000624587 2492 ntBASIC17.8■□□□□ 0.44
NDE1Q9NXR1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 AC011676.5-201ENST00000624864 2660 ntBASIC17.8■□□□□ 0.44
NDE1Q9NXR1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDE1Q9NXR1 OR6D1P-203ENST00000641209 4860 ntBASIC17.8■□□□□ 0.44
NDE1Q9NXR1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 BX276092.2-201ENST00000417668 665 ntBASIC17.79■□□□□ 0.44
NDE1Q9NXR1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDE1Q9NXR1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 AC022211.2-201ENST00000585075 2527 ntBASIC17.78■□□□□ 0.44
NDE1Q9NXR1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.78■□□□□ 0.44
NDE1Q9NXR1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDE1Q9NXR1 AL118508.1-201ENST00000613502 2345 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms