Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 AC009237.14-201ENST00000609975 1594 ntBASIC17.01■□□□□ 0.31
CHD8Q9HCK8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHD8Q9HCK8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 TK1-204ENST00000590430 683 ntTSL 3 BASIC17■□□□□ 0.31
CHD8Q9HCK8 AC027307.3-201ENST00000594262 1100 ntBASIC17■□□□□ 0.31
CHD8Q9HCK8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CHD8Q9HCK8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHD8Q9HCK8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHD8Q9HCK8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17■□□□□ 0.31
CHD8Q9HCK8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17■□□□□ 0.31
CHD8Q9HCK8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHD8Q9HCK8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17■□□□□ 0.31
CHD8Q9HCK8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CHD8Q9HCK8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 AC073592.4-201ENST00000623827 446 ntBASIC16.99■□□□□ 0.31
CHD8Q9HCK8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 AC105339.1-204ENST00000636249 355 ntBASIC16.99■□□□□ 0.31
CHD8Q9HCK8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHD8Q9HCK8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 AC113404.2-201ENST00000507884 177 ntBASIC16.98■□□□□ 0.31
CHD8Q9HCK8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 AC006504.4-201ENST00000592118 1568 ntBASIC16.98■□□□□ 0.31
CHD8Q9HCK8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHD8Q9HCK8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms