Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.69■□□□□ 0.42
LRTM1Q9HBL6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AC093827.2-201ENST00000512654 315 ntBASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AP005242.2-201ENST00000580065 1175 ntBASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 AP006294.2-201ENST00000641667 209 ntBASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRTM1Q9HBL6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 AC036111.1-201ENST00000533973 1582 ntBASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
LRTM1Q9HBL6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRTM1Q9HBL6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms