Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 AC009533.2-201ENST00000543664 586 ntBASIC20.03■□□□□ 0.8
HIPK3Q9H422 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 AC027601.4-201ENST00000611259 610 ntBASIC20.03■□□□□ 0.8
HIPK3Q9H422 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 AC068472.1-201ENST00000474589 881 ntBASIC20.02■□□□□ 0.8
HIPK3Q9H422 IGHV3-22-201ENST00000520721 359 ntBASIC20.02■□□□□ 0.8
HIPK3Q9H422 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.02■□□□□ 0.8
HIPK3Q9H422 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HIPK3Q9H422 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HIPK3Q9H422 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HIPK3Q9H422 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HIPK3Q9H422 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.02■□□□□ 0.79
HIPK3Q9H422 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.02■□□□□ 0.79
HIPK3Q9H422 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HIPK3Q9H422 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 AC125437.2-201ENST00000625180 2167 ntBASIC20.01■□□□□ 0.79
HIPK3Q9H422 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MIR149-201ENST00000384879 89 ntBASIC20.01■□□□□ 0.79
HIPK3Q9H422 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 AC021087.4-201ENST00000563761 564 ntBASIC20.01■□□□□ 0.79
HIPK3Q9H422 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HIPK3Q9H422 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 MTMR9LP-203ENST00000426597 1545 ntBASIC20.01■□□□□ 0.79
HIPK3Q9H422 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HIPK3Q9H422 NFYC-AS1-201ENST00000606277 1687 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20■□□□□ 0.79
HIPK3Q9H422 INTS4P1-201ENST00000438455 1935 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20■□□□□ 0.79
HIPK3Q9H422 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20■□□□□ 0.79
HIPK3Q9H422 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HIPK3Q9H422 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20■□□□□ 0.79
HIPK3Q9H422 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20■□□□□ 0.79
HIPK3Q9H422 MED15P5-201ENST00000423150 992 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20■□□□□ 0.79
HIPK3Q9H422 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 AC140113.2-201ENST00000604370 208 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20■□□□□ 0.79
HIPK3Q9H422 FAM197Y3-203ENST00000618346 717 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 AC055717.3-201ENST00000622967 595 ntBASIC20■□□□□ 0.79
HIPK3Q9H422 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20■□□□□ 0.79
HIPK3Q9H422 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20■□□□□ 0.79
HIPK3Q9H422 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms