Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NDNQ99608 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDNQ99608 AC135776.1-201ENST00000319817 2481 ntBASIC18.45■□□□□ 0.54
NDNQ99608 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDNQ99608 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDNQ99608 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDNQ99608 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NDNQ99608 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.44■□□□□ 0.54
NDNQ99608 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.44■□□□□ 0.54
NDNQ99608 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.44■□□□□ 0.54
NDNQ99608 MIR564-202ENST00000385049 94 ntBASIC18.44■□□□□ 0.54
NDNQ99608 MIR718-201ENST00000390190 70 ntBASIC18.44■□□□□ 0.54
NDNQ99608 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 AL390955.1-201ENST00000428694 934 ntBASIC18.44■□□□□ 0.54
NDNQ99608 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.44■□□□□ 0.54
NDNQ99608 AP000525.1-201ENST00000608286 694 ntBASIC18.44■□□□□ 0.54
NDNQ99608 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.44■□□□□ 0.54
NDNQ99608 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NDNQ99608 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.44■□□□□ 0.54
NDNQ99608 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDNQ99608 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.44■□□□□ 0.54
NDNQ99608 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.43■□□□□ 0.54
NDNQ99608 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 AC068880.1-201ENST00000507289 2297 ntBASIC18.43■□□□□ 0.54
NDNQ99608 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDNQ99608 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 SNORA78-201ENST00000459373 127 ntBASIC18.43■□□□□ 0.54
NDNQ99608 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.43■□□□□ 0.54
NDNQ99608 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
NDNQ99608 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
NDNQ99608 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDNQ99608 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NDNQ99608 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NDNQ99608 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.43■□□□□ 0.54
NDNQ99608 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NDNQ99608 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NDNQ99608 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 UNC93B2-201ENST00000285383 730 ntBASIC18.42■□□□□ 0.54
NDNQ99608 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NDNQ99608 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 CA15P1-201ENST00000481698 905 ntBASIC18.42■□□□□ 0.54
NDNQ99608 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.42■□□□□ 0.54
NDNQ99608 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 AP005242.2-201ENST00000580065 1175 ntBASIC18.42■□□□□ 0.54
NDNQ99608 MIR4785-201ENST00000585005 73 ntBASIC18.42■□□□□ 0.54
NDNQ99608 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.42■□□□□ 0.54
NDNQ99608 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.42■□□□□ 0.54
NDNQ99608 AC036111.1-201ENST00000533973 1582 ntBASIC18.42■□□□□ 0.54
NDNQ99608 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
NDNQ99608 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDNQ99608 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms