Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 KRT8P32-201ENST00000512863 1461 ntBASIC15.55■□□□□ 0.08
SPG11Q96JI7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 FAM8A3P-201ENST00000427218 844 ntBASIC15.55■□□□□ 0.08
SPG11Q96JI7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 FGFR3P6-201ENST00000457012 610 ntBASIC15.55■□□□□ 0.08
SPG11Q96JI7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 MIR3687-2-201ENST00000577708 61 ntBASIC15.55■□□□□ 0.08
SPG11Q96JI7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 MIR3687-1-201ENST00000614492 61 ntBASIC15.55■□□□□ 0.08
SPG11Q96JI7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
SPG11Q96JI7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SPG11Q96JI7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 RPS2P1-201ENST00000434010 821 ntBASIC15.54■□□□□ 0.08
SPG11Q96JI7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 AC125437.2-201ENST00000625180 2167 ntBASIC15.54■□□□□ 0.08
SPG11Q96JI7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 IRX1P1-201ENST00000438849 1838 ntBASIC15.54■□□□□ 0.08
SPG11Q96JI7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SPG11Q96JI7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SPG11Q96JI7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 KRT8P50-201ENST00000562022 1438 ntBASIC15.53■□□□□ 0.08
SPG11Q96JI7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 AC002347.1-201ENST00000569543 541 ntBASIC15.53■□□□□ 0.08
SPG11Q96JI7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 AL138831.2-201ENST00000606564 490 ntBASIC15.53■□□□□ 0.08
SPG11Q96JI7 AL596442.2-201ENST00000610240 980 ntBASIC15.53■□□□□ 0.08
SPG11Q96JI7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.53■□□□□ 0.08
SPG11Q96JI7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SPG11Q96JI7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPG11Q96JI7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPG11Q96JI7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPG11Q96JI7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SPG11Q96JI7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SPG11Q96JI7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 ABCD1P5-201ENST00000445663 754 ntBASIC15.52■□□□□ 0.08
SPG11Q96JI7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.52■□□□□ 0.08
SPG11Q96JI7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms