Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 MTND2P38-201ENST00000522536 667 ntBASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AP003716.1-203ENST00000533670 613 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC108673.3-201ENST00000609183 335 ntBASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 AC131649.1-201ENST00000569215 1313 ntBASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A3Q96HJ5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 AC090330.1-201ENST00000588646 764 ntBASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 AC130371.2-201ENST00000619443 611 ntBASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A3Q96HJ5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AL121578.1-201ENST00000428051 892 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 RBM17P1-201ENST00000453646 1190 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AL162390.1-201ENST00000622201 1246 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 TEX21P-204ENST00000641479 1693 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC067852.2-201ENST00000590513 2313 ntBASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A3Q96HJ5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A3Q96HJ5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A3Q96HJ5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms