Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC005332.3-201ENST00000589904 676 ntBASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0A1Q93050 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 AC004870.1-201ENST00000315132 882 ntBASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 AP000974.1-201ENST00000623909 2387 ntBASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A1Q93050 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 AC246785.2-201ENST00000432512 513 ntBASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 AC024563.2-201ENST00000603282 481 ntBASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 BX323043.1-201ENST00000641006 1765 ntBASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 CROCCP3-202ENST00000420820 1947 ntBASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6V0A1Q93050 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 TOB2P1-201ENST00000469761 992 ntBASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 AC018445.3-201ENST00000624177 1945 ntBASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A1Q93050 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP6V0A1Q93050 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 KRT89P-201ENST00000620027 1478 ntBASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 AC090616.6-201ENST00000582640 721 ntBASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 AL390719.2-201ENST00000606993 987 ntBASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 IGHV3-41-201ENST00000613121 348 ntBASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A1Q93050 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A1Q93050 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ATP6V0A1Q93050 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A1Q93050 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP6V0A1Q93050 SDHAP2-201ENST00000455183 2001 ntBASIC20.5■□□□□ 0.87
ATP6V0A1Q93050 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms