Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 AL133373.2-201ENST00000623187 2828 ntBASIC17.35■□□□□ 0.37
TM9SF4Q92544 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.35■□□□□ 0.37
TM9SF4Q92544 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM9SF4Q92544 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 HBZP1-201ENST00000354915 429 ntBASIC17.34■□□□□ 0.37
TM9SF4Q92544 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 MCCD1P1-208ENST00000445732 328 ntBASIC17.34■□□□□ 0.37
TM9SF4Q92544 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.34■□□□□ 0.37
TM9SF4Q92544 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM9SF4Q92544 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 WIZP1-201ENST00000531444 2299 ntBASIC17.33■□□□□ 0.37
TM9SF4Q92544 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
TM9SF4Q92544 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM9SF4Q92544 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 MIR3180-5-201ENST00000583743 153 ntBASIC17.33■□□□□ 0.36
TM9SF4Q92544 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM9SF4Q92544 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
TM9SF4Q92544 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TM9SF4Q92544 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms