Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 AC034236.2-201ENST00000606662 1610 ntBASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 PHGDH-209ENST00000641074 1780 ntBASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 REXO1L12P-201ENST00000622156 912 ntBASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 LINC00896-202ENST00000609602 2128 ntBASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATG4AQ8WYN0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AC036111.1-201ENST00000533973 1582 ntBASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AP000593.1-201ENST00000393668 712 ntBASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 RPS2P55-201ENST00000397318 883 ntBASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 CRYGFP-201ENST00000418459 633 ntBASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AC107956.1-201ENST00000494359 873 ntBASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATG4AQ8WYN0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 GCSHP5-201ENST00000443090 522 ntBASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATG4AQ8WYN0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 GNAS-203ENST00000306120 1878 ntBASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.04■□□□□ 0.64
ATG4AQ8WYN0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms