Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AL096828.2-201ENST00000567259 1965 ntBASIC18.53■□□□□ 0.56
CHD5Q8TDI0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 PKD1P6-201ENST00000343738 4769 ntBASIC18.53■□□□□ 0.56
CHD5Q8TDI0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 Z83836.1-201ENST00000624605 1642 ntBASIC18.53■□□□□ 0.56
CHD5Q8TDI0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 KRT8P47-201ENST00000604727 1398 ntBASIC18.53■□□□□ 0.56
CHD5Q8TDI0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD5Q8TDI0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 ATP5G2P1-201ENST00000433580 426 ntBASIC18.52■□□□□ 0.56
CHD5Q8TDI0 DRAXINP1-201ENST00000437611 948 ntBASIC18.52■□□□□ 0.56
CHD5Q8TDI0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 AP003733.1-201ENST00000491725 852 ntBASIC18.52■□□□□ 0.56
CHD5Q8TDI0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 AL592071.1-201ENST00000611956 408 ntBASIC18.52■□□□□ 0.56
CHD5Q8TDI0 AL353692.3-201ENST00000407031 1396 ntBASIC18.52■□□□□ 0.56
CHD5Q8TDI0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD5Q8TDI0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD5Q8TDI0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD5Q8TDI0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD5Q8TDI0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.52■□□□□ 0.55
CHD5Q8TDI0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD5Q8TDI0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 AC246785.2-201ENST00000432512 513 ntBASIC18.51■□□□□ 0.55
CHD5Q8TDI0 BX276092.5-203ENST00000456199 560 ntBASIC18.51■□□□□ 0.55
CHD5Q8TDI0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD5Q8TDI0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms