Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01006Q8NI28 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01006Q8NI28 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 RCN1P2-201ENST00000398357 915 ntBASIC14.27□□□□□ -0.13
LINC01006Q8NI28 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 PMS2P1-201ENST00000431037 1228 ntBASIC14.27□□□□□ -0.13
LINC01006Q8NI28 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 AC117500.6-201ENST00000624871 588 ntBASIC14.27□□□□□ -0.13
LINC01006Q8NI28 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.27□□□□□ -0.13
LINC01006Q8NI28 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01006Q8NI28 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 TP73-AS1-210ENST00000637775 1455 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SDHAP2-201ENST00000455183 2001 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MIR574-201ENST00000385209 96 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AC093909.1-201ENST00000504731 1122 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AC005336.2-201ENST00000593183 939 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AC148477.8-201ENST00000624298 468 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MYLKP1-201ENST00000509077 1580 ntBASIC14.26□□□□□ -0.13
LINC01006Q8NI28 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01006Q8NI28 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 AC112777.1-201ENST00000540175 1423 ntBASIC14.25□□□□□ -0.13
LINC01006Q8NI28 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 AL049812.1-201ENST00000432563 2267 ntBASIC14.25□□□□□ -0.13
LINC01006Q8NI28 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01006Q8NI28 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms