Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 FOSL1P1-201ENST00000511041 816 ntBASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 MIR4674-201ENST00000582457 87 ntBASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 AC064862.7-201ENST00000604520 867 ntBASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC17A8Q8NDX2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 MTMR9LP-203ENST00000426597 1545 ntBASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 KRT8P7-201ENST00000533003 1432 ntBASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 AL035633.1-201ENST00000406139 838 ntBASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC17A8Q8NDX2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 AC008556.1-201ENST00000610908 2040 ntBASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 AP000523.1-201ENST00000398242 1049 ntBASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 KRT18P41-201ENST00000518924 1277 ntBASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 TPSP2-201ENST00000561760 610 ntBASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 AC106730.1-201ENST00000566722 1090 ntBASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC17A8Q8NDX2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 SPDYE13P-201ENST00000445314 798 ntBASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 AC011498.5-201ENST00000592027 486 ntBASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 AL031598.1-201ENST00000561511 1773 ntBASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 TNXA-203ENST00000507684 2038 ntBASIC20.61■□□□□ 0.89
SLC17A8Q8NDX2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms