Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
C3orf56Q8N813 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C3orf56Q8N813 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C3orf56Q8N813 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C3orf56Q8N813 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C3orf56Q8N813 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AC026471.1-201ENST00000564629 3026 ntBASIC14.35□□□□□ -0.11
C3orf56Q8N813 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AC034236.2-201ENST00000606662 1610 ntBASIC14.35□□□□□ -0.11
C3orf56Q8N813 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 KRT18P3-201ENST00000451602 1288 ntBASIC14.35□□□□□ -0.11
C3orf56Q8N813 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AC145285.3-201ENST00000564603 959 ntBASIC14.35□□□□□ -0.11
C3orf56Q8N813 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C3orf56Q8N813 AC020907.5-201ENST00000624372 1936 ntBASIC14.35□□□□□ -0.11
C3orf56Q8N813 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C3orf56Q8N813 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.34□□□□□ -0.11
C3orf56Q8N813 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 HLA-J-201ENST00000462773 1622 ntBASIC14.34□□□□□ -0.11
C3orf56Q8N813 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 AC112482.1-201ENST00000492080 688 ntBASIC14.34□□□□□ -0.11
C3orf56Q8N813 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 AC040169.1-201ENST00000565382 521 ntBASIC14.34□□□□□ -0.11
C3orf56Q8N813 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.34□□□□□ -0.11
C3orf56Q8N813 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C3orf56Q8N813 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
C3orf56Q8N813 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
C3orf56Q8N813 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
C3orf56Q8N813 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
C3orf56Q8N813 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.33□□□□□ -0.11
C3orf56Q8N813 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 KRT89P-201ENST00000620027 1478 ntBASIC14.33□□□□□ -0.12
C3orf56Q8N813 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 AL512353.2-201ENST00000448759 1962 ntBASIC14.33□□□□□ -0.12
C3orf56Q8N813 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 FGFR3P6-201ENST00000457012 610 ntBASIC14.33□□□□□ -0.12
C3orf56Q8N813 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.33□□□□□ -0.12
C3orf56Q8N813 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
C3orf56Q8N813 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms