Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IL9RP2-201ENST00000423948 1312 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AP000974.1-201ENST00000623909 2387 ntBASIC18.64■□□□□ 0.58
SYNPOQ8N3V7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.64■□□□□ 0.58
SYNPOQ8N3V7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 MIR574-201ENST00000385209 96 ntBASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 AF186996.4-201ENST00000467186 377 ntBASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 AC093909.1-201ENST00000504731 1122 ntBASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 AF228730.7-201ENST00000641842 219 ntBASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPOQ8N3V7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 TP73-AS1-207ENST00000624167 988 ntBASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPOQ8N3V7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 AL031284.1-201ENST00000419297 478 ntBASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 AC091607.1-201ENST00000490318 1060 ntBASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 KRT18P41-201ENST00000518924 1277 ntBASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 BNIP3P18-201ENST00000593976 575 ntBASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 Z98044.1-201ENST00000632503 1764 ntBASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNPOQ8N3V7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms