Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 AC135776.1-201ENST00000319817 2481 ntBASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC65Q8IXS2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 ATP5G1P1-201ENST00000448724 379 ntBASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 AC099343.3-201ENST00000605834 2503 ntBASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CCDC65Q8IXS2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 ESPNP-201ENST00000270691 2015 ntBASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC65Q8IXS2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 AC010203.1-204ENST00000548782 407 ntBASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 AC092865.7-201ENST00000641832 219 ntBASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 AC093677.2-201ENST00000600169 1863 ntBASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC65Q8IXS2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC65Q8IXS2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC65Q8IXS2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC65Q8IXS2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms