Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 NPAP1P7-201ENST00000613027 823 ntBASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 AC005082.1-201ENST00000413042 2259 ntBASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SCN4BQ8IWT1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 CHCHD2P8-201ENST00000429873 447 ntBASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 AC092329.2-201ENST00000598402 547 ntBASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCN4BQ8IWT1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 KRT18P1-202ENST00000452408 1331 ntBASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 AP002414.4-201ENST00000589764 1148 ntBASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 GPR32P1-201ENST00000601788 811 ntBASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 AL390719.2-201ENST00000606993 987 ntBASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SCN4BQ8IWT1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCN4BQ8IWT1 AP000974.1-201ENST00000623909 2387 ntBASIC19.33■□□□□ 0.69
SCN4BQ8IWT1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCN4BQ8IWT1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 IGHGP-201ENST00000390555 1178 ntBASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 AP002383.4-201ENST00000442518 975 ntBASIC19.33■□□□□ 0.68
SCN4BQ8IWT1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms