Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RP1L1Q8IWN7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 AC010327.4-202ENST00000591484 748 ntBASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 IGHV3-22-201ENST00000520721 359 ntBASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
RP1L1Q8IWN7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AC073648.2-201ENST00000510116 352 ntBASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AC027796.2-201ENST00000575326 344 ntBASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RP1L1Q8IWN7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 AC055717.3-201ENST00000622967 595 ntBASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 AC008556.1-201ENST00000610908 2040 ntBASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.6■□□□□ 0.25
RP1L1Q8IWN7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms