Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 MIR3180-5-201ENST00000583743 153 ntBASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00346Q8IVM7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00346Q8IVM7 KRT8P50-201ENST00000562022 1438 ntBASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 MIR1238-201ENST00000408483 83 ntBASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 AP003041.3-201ENST00000527151 707 ntBASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 AC093677.2-201ENST00000600169 1863 ntBASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00346Q8IVM7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AP000593.1-201ENST00000393668 712 ntBASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AL355075.4-201ENST00000554988 638 ntBASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AP006294.2-201ENST00000641667 209 ntBASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 AC068880.1-201ENST00000507289 2297 ntBASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00346Q8IVM7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms