Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 LINC02199-201ENST00000506655 2702 ntBASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LYSMD2Q8IV50 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD2Q8IV50 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 HEIH-201ENST00000623091 1652 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 KRT18P11-201ENST00000435214 1283 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 DUX4L16-201ENST00000555130 1264 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 NTF6G-201ENST00000591094 616 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 AGGF1P2-201ENST00000426656 2106 ntBASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD2Q8IV50 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LYSMD2Q8IV50 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
LYSMD2Q8IV50 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
LYSMD2Q8IV50 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
LYSMD2Q8IV50 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD2Q8IV50 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms