Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 KRT18P61-201ENST00000585825 1298 ntBASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 HEIH-201ENST00000623091 1652 ntBASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF546Q86UE3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 PCDH8P1-201ENST00000428983 2773 ntBASIC15.29■□□□□ 0.04
ZNF546Q86UE3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF546Q86UE3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF546Q86UE3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.27■□□□□ 0.04
ZNF546Q86UE3 CYP2T3P-201ENST00000601990 817 ntBASIC15.27■□□□□ 0.04
ZNF546Q86UE3 AL589743.5-201ENST00000616611 1050 ntBASIC15.27■□□□□ 0.04
ZNF546Q86UE3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZNF546Q86UE3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms