Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTOP1Q7RTM1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTOP1Q7RTM1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OTOP1Q7RTM1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 HNRNPDP1-201ENST00000439535 754 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 SCARNA2-201ENST00000458748 420 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AC145285.3-201ENST00000564603 959 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AC011840.4-201ENST00000578471 627 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AL356488.2-201ENST00000602755 427 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AL512353.2-201ENST00000448759 1962 ntBASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
OTOP1Q7RTM1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 AC132008.2-207ENST00000454517 770 ntBASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.23■□□□□ 0.99
OTOP1Q7RTM1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 HOXB1-202ENST00000577092 1414 ntBASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 FAM197Y3-203ENST00000618346 717 ntBASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
OTOP1Q7RTM1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 AC104109.2-201ENST00000602919 1418 ntBASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 MED15P5-201ENST00000423150 992 ntBASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 AC083906.6-201ENST00000641366 219 ntBASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 AC079781.4-201ENST00000641908 219 ntBASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.21■□□□□ 0.99
OTOP1Q7RTM1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms