Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 AL512353.2-201ENST00000448759 1962 ntBASIC17.24■□□□□ 0.35
RTL4Q6ZR62 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 HOMER2P1-201ENST00000455653 964 ntBASIC17.24■□□□□ 0.35
RTL4Q6ZR62 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 NTF6B-201ENST00000591913 560 ntBASIC17.24■□□□□ 0.35
RTL4Q6ZR62 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTL4Q6ZR62 AC007613.1-201ENST00000572811 2597 ntBASIC17.24■□□□□ 0.35
RTL4Q6ZR62 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 FAM8A6P-201ENST00000407496 1135 ntBASIC17.23■□□□□ 0.35
RTL4Q6ZR62 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 AC036111.1-201ENST00000533973 1582 ntBASIC17.23■□□□□ 0.35
RTL4Q6ZR62 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL4Q6ZR62 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 RCC2P3-201ENST00000418112 1537 ntBASIC17.22■□□□□ 0.35
RTL4Q6ZR62 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 WIZP1-201ENST00000531444 2299 ntBASIC17.22■□□□□ 0.35
RTL4Q6ZR62 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 AL441883.1-201ENST00000566170 1045 ntBASIC17.22■□□□□ 0.35
RTL4Q6ZR62 AC087388.1-201ENST00000571370 1112 ntBASIC17.22■□□□□ 0.35
RTL4Q6ZR62 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 AL109659.2-201ENST00000606809 1674 ntBASIC17.22■□□□□ 0.35
RTL4Q6ZR62 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTL4Q6ZR62 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms