Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NHLRC1Q6VVB1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 HMGA1P5-201ENST00000412453 271 ntBASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 AC097493.4-201ENST00000641197 219 ntBASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NHLRC1Q6VVB1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 AL138966.2-201ENST00000621997 464 ntBASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 AL163051.1-201ENST00000569214 1512 ntBASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NHLRC1Q6VVB1 KRT18P22-201ENST00000402024 1347 ntBASIC16.48■□□□□ 0.23
NHLRC1Q6VVB1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NHLRC1Q6VVB1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms