Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TREML4Q6UXN2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC15.07■□□□□ 0
TREML4Q6UXN2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.07■□□□□ 0
TREML4Q6UXN2 AL512604.3-201ENST00000569583 964 ntBASIC15.07■□□□□ 0
TREML4Q6UXN2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 AC108359.1-201ENST00000616451 1211 ntBASIC15.07■□□□□ 0
TREML4Q6UXN2 AC116407.4-201ENST00000623319 1061 ntBASIC15.07■□□□□ 0
TREML4Q6UXN2 AC010653.2-201ENST00000623505 997 ntBASIC15.07■□□□□ 0
TREML4Q6UXN2 AP003400.6-201ENST00000624698 740 ntBASIC15.07■□□□□ 0
TREML4Q6UXN2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.07■□□□□ 0
TREML4Q6UXN2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREML4Q6UXN2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.07■□□□□ 0
TREML4Q6UXN2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 LTB4R2-202ENST00000528054 3092 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.06■□□□□ 0
TREML4Q6UXN2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.06■□□□□ 0
TREML4Q6UXN2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 ABALON-201ENST00000629058 1903 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 AC004980.1-204ENST00000429707 299 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 SLC25A1P2-201ENST00000430693 912 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.06■□□□□ 0
TREML4Q6UXN2 YBX1P10-201ENST00000444752 975 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 AL359075.1-203ENST00000462729 1002 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.06■□□□□ 0
TREML4Q6UXN2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.06■□□□□ 0
TREML4Q6UXN2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.06■□□□□ 0
TREML4Q6UXN2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 AP000692.2-201ENST00000608391 879 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 GPALPP1-207ENST00000611650 899 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TREML4Q6UXN2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 AP006587.1-201ENST00000534129 1502 ntBASIC15.06■□□□□ 0
TREML4Q6UXN2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.06■□□□□ 0
TREML4Q6UXN2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TREML4Q6UXN2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.06■□□□□ 0
TREML4Q6UXN2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.05■□□□□ 0
TREML4Q6UXN2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
TREML4Q6UXN2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TREML4Q6UXN2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TREML4Q6UXN2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms