Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AP003071.4-201ENST00000562276 1284 ntBASIC16.91■□□□□ 0.3
ZNF544Q6NX49 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF544Q6NX49 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 FAM197Y1-201ENST00000421178 764 ntBASIC16.9■□□□□ 0.3
ZNF544Q6NX49 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 LINC01023-201ENST00000606054 436 ntBASIC16.9■□□□□ 0.3
ZNF544Q6NX49 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF544Q6NX49 AL031598.1-201ENST00000561511 1773 ntBASIC16.89■□□□□ 0.3
ZNF544Q6NX49 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF544Q6NX49 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.89■□□□□ 0.3
ZNF544Q6NX49 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF544Q6NX49 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF544Q6NX49 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
ZNF544Q6NX49 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 NIFKP9-201ENST00000419265 221 ntBASIC16.89■□□□□ 0.29
ZNF544Q6NX49 AL355075.4-201ENST00000554988 638 ntBASIC16.89■□□□□ 0.29
ZNF544Q6NX49 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 AC104417.2-201ENST00000562989 1793 ntBASIC16.89■□□□□ 0.29
ZNF544Q6NX49 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 AC093525.10-201ENST00000625130 1569 ntBASIC16.89■□□□□ 0.29
ZNF544Q6NX49 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF544Q6NX49 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF544Q6NX49 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms