Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRPF38BQ5VTL8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
PRPF38BQ5VTL8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 KRT17P7-201ENST00000451704 1104 ntBASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 RN7SL692P-201ENST00000464677 288 ntBASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 AC116407.2-201ENST00000613639 860 ntBASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PRPF38BQ5VTL8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.83■□□□□ 0.76
PRPF38BQ5VTL8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 AL132655.2-201ENST00000596276 594 ntBASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRPF38BQ5VTL8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PRPF38BQ5VTL8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PRPF38BQ5VTL8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms