Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
UBR4Q5T4S7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC9.99□□□□□ -0.81
UBR4Q5T4S7 MIR4259-201ENST00000584466 101 ntBASIC9.99□□□□□ -0.81
UBR4Q5T4S7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC9.99□□□□□ -0.81
UBR4Q5T4S7 AC006538.1-201ENST00000567905 1585 ntBASIC9.98□□□□□ -0.81
UBR4Q5T4S7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 AC107890.1-201ENST00000422478 521 ntBASIC9.98□□□□□ -0.81
UBR4Q5T4S7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 AP001271.2-201ENST00000624018 1556 ntBASIC9.98□□□□□ -0.81
UBR4Q5T4S7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 DGCR5-201ENST00000399539 862 ntBASIC9.98□□□□□ -0.81
UBR4Q5T4S7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
UBR4Q5T4S7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC108073.2-201ENST00000464002 357 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AL390754.1-201ENST00000619088 582 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 ABCD1P5-201ENST00000445663 754 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 REXO1L3P-201ENST00000622202 1288 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 SLC25A39P2-201ENST00000537614 270 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 MIR6869-201ENST00000619434 62 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AC006504.4-201ENST00000592118 1568 ntBASIC9.97□□□□□ -0.81
UBR4Q5T4S7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms