Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC58Q4VC31 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC58Q4VC31 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC58Q4VC31 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
CCDC58Q4VC31 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CCDC58Q4VC31 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.45■□□□□ 0.22
CCDC58Q4VC31 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 AC138028.4-201ENST00000564984 1845 ntBASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC58Q4VC31 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 POM121L13P-201ENST00000422362 380 ntBASIC16.44■□□□□ 0.22
CCDC58Q4VC31 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 NCF1B-203ENST00000435988 1254 ntBASIC16.44■□□□□ 0.22
CCDC58Q4VC31 UNC93B4-201ENST00000505679 747 ntBASIC16.44■□□□□ 0.22
CCDC58Q4VC31 PRSS44-201ENST00000515154 1146 ntBASIC16.44■□□□□ 0.22
CCDC58Q4VC31 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 AC083880.1-201ENST00000608266 535 ntBASIC16.44■□□□□ 0.22
CCDC58Q4VC31 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC58Q4VC31 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 AL357033.4-201ENST00000617703 1807 ntBASIC16.43■□□□□ 0.22
CCDC58Q4VC31 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC58Q4VC31 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms