Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX4Q33E94 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
RFX4Q33E94 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX4Q33E94 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.11■□□□□ 0.33
RFX4Q33E94 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX4Q33E94 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
RFX4Q33E94 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX4Q33E94 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
RFX4Q33E94 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFX4Q33E94 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFX4Q33E94 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.11■□□□□ 0.33
RFX4Q33E94 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.11■□□□□ 0.33
RFX4Q33E94 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFX4Q33E94 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFX4Q33E94 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RFX4Q33E94 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFX4Q33E94 AC141586.5-201ENST00000624546 2050 ntBASIC17.1■□□□□ 0.33
RFX4Q33E94 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX4Q33E94 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX4Q33E94 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.1■□□□□ 0.33
RFX4Q33E94 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.1■□□□□ 0.33
RFX4Q33E94 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.1■□□□□ 0.33
RFX4Q33E94 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 MTDHP1-201ENST00000605323 784 ntBASIC17.1■□□□□ 0.33
RFX4Q33E94 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 KRT8P41-201ENST00000533985 1514 ntBASIC17.1■□□□□ 0.33
RFX4Q33E94 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX4Q33E94 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.1■□□□□ 0.33
RFX4Q33E94 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFX4Q33E94 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.1■□□□□ 0.33
RFX4Q33E94 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 KRT17P3-201ENST00000420566 1262 ntBASIC17.09■□□□□ 0.33
RFX4Q33E94 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.09■□□□□ 0.33
RFX4Q33E94 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFX4Q33E94 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
RFX4Q33E94 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX4Q33E94 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFX4Q33E94 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFX4Q33E94 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX4Q33E94 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX4Q33E94 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.08■□□□□ 0.33
RFX4Q33E94 AC099398.1-201ENST00000567919 2776 ntBASIC17.08■□□□□ 0.33
RFX4Q33E94 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFX4Q33E94 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms