Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.76■□□□□ 0.43
RSPO4Q2I0M5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 KRT18P2-201ENST00000447938 1258 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 MIR4745-201ENST00000577608 62 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 C20orf181-201ENST00000623918 480 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AF228730.6-201ENST00000641497 218 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC084121.3-201ENST00000641716 218 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC105233.6-201ENST00000642093 218 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AL512408.1-201ENST00000569378 2000 ntBASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RSPO4Q2I0M5 AC097374.2-201ENST00000618617 1306 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 LINC01521-201ENST00000504184 1943 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 AC093512.1-201ENST00000617969 520 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 AL139288.1-201ENST00000623748 933 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 AC002310.6-201ENST00000624451 1377 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 SDHAP1-207ENST00000440850 2000 ntBASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RSPO4Q2I0M5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 AC006333.2-201ENST00000607957 2099 ntBASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO4Q2I0M5 AC034236.2-201ENST00000606662 1610 ntBASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 AC020907.5-201ENST00000624372 1936 ntBASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO4Q2I0M5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms