Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIST3H3Q16695 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
HIST3H3Q16695 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 AL024508.2-201ENST00000607749 1894 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 LINC01126-201ENST00000623515 1646 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 TERF1P1-201ENST00000311003 1181 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 AC211429.1-201ENST00000415277 523 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 LIN28AP1-201ENST00000429574 405 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 AL031432.5-201ENST00000641059 760 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 AC099343.3-201ENST00000605834 2503 ntBASIC16.21■□□□□ 0.19
HIST3H3Q16695 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HIST3H3Q16695 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.21■□□□□ 0.19
HIST3H3Q16695 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST3H3Q16695 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.21■□□□□ 0.18
HIST3H3Q16695 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 GCSHP2-201ENST00000560971 527 ntBASIC16.2■□□□□ 0.18
HIST3H3Q16695 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
HIST3H3Q16695 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST3H3Q16695 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HIST3H3Q16695 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST3H3Q16695 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST3H3Q16695 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST3H3Q16695 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms