Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNA1P78396 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNA1P78396 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNA1P78396 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 RPS2P28-201ENST00000314255 741 ntBASIC20.87■□□□□ 0.93
CCNA1P78396 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.87■□□□□ 0.93
CCNA1P78396 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.87■□□□□ 0.93
CCNA1P78396 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.87■□□□□ 0.93
CCNA1P78396 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 AC139530.3-201ENST00000620344 690 ntBASIC20.87■□□□□ 0.93
CCNA1P78396 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCNA1P78396 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CCNA1P78396 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNA1P78396 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNA1P78396 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.86■□□□□ 0.93
CCNA1P78396 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.86■□□□□ 0.93
CCNA1P78396 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNA1P78396 AC106730.1-201ENST00000566722 1090 ntBASIC20.86■□□□□ 0.93
CCNA1P78396 AC139887.3-201ENST00000568585 713 ntBASIC20.86■□□□□ 0.93
CCNA1P78396 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.86■□□□□ 0.93
CCNA1P78396 MTDHP3-201ENST00000594186 672 ntBASIC20.86■□□□□ 0.93
CCNA1P78396 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNA1P78396 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CCNA1P78396 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.86■□□□□ 0.93
CCNA1P78396 AC009154.2-201ENST00000621177 724 ntBASIC20.86■□□□□ 0.93
CCNA1P78396 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNA1P78396 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNA1P78396 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNA1P78396 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CCNA1P78396 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCNA1P78396 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNA1P78396 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
CCNA1P78396 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.85■□□□□ 0.93
CCNA1P78396 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 FGFR3P6-201ENST00000457012 610 ntBASIC20.85■□□□□ 0.93
CCNA1P78396 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.85■□□□□ 0.93
CCNA1P78396 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.85■□□□□ 0.93
CCNA1P78396 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
CCNA1P78396 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCNA1P78396 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNA1P78396 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNA1P78396 AC243591.1-201ENST00000452967 1364 ntBASIC20.85■□□□□ 0.93
CCNA1P78396 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCNA1P78396 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.85■□□□□ 0.93
CCNA1P78396 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCNA1P78396 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCNA1P78396 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.84■□□□□ 0.93
CCNA1P78396 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CCNA1P78396 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNA1P78396 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms