Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCA4P78363 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA4P78363 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCA4P78363 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.8■□□□□ 0.12
ABCA4P78363 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.8■□□□□ 0.12
ABCA4P78363 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
ABCA4P78363 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA4P78363 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA4P78363 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
ABCA4P78363 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ABCA4P78363 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.8■□□□□ 0.12
ABCA4P78363 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
ABCA4P78363 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA4P78363 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCA4P78363 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ABCA4P78363 GUSBP12-201ENST00000513727 720 ntBASIC15.79■□□□□ 0.12
ABCA4P78363 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCA4P78363 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA4P78363 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA4P78363 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
ABCA4P78363 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 AL049812.1-201ENST00000432563 2267 ntBASIC15.79■□□□□ 0.12
ABCA4P78363 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 AC018712.1-201ENST00000455767 687 ntBASIC15.79■□□□□ 0.12
ABCA4P78363 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.79■□□□□ 0.12
ABCA4P78363 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ABCA4P78363 AC148477.8-201ENST00000624298 468 ntBASIC15.79■□□□□ 0.12
ABCA4P78363 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA4P78363 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.79■□□□□ 0.12
ABCA4P78363 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ABCA4P78363 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
ABCA4P78363 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ABCA4P78363 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.78■□□□□ 0.12
ABCA4P78363 AP001005.1-201ENST00000571755 1248 ntBASIC15.78■□□□□ 0.12
ABCA4P78363 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA4P78363 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.78■□□□□ 0.12
ABCA4P78363 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.78■□□□□ 0.12
ABCA4P78363 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ABCA4P78363 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
ABCA4P78363 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.78■□□□□ 0.12
ABCA4P78363 AC027601.4-201ENST00000611259 610 ntBASIC15.78■□□□□ 0.12
ABCA4P78363 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ABCA4P78363 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ABCA4P78363 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ABCA4P78363 AC141586.3-201ENST00000562166 1838 ntBASIC15.78■□□□□ 0.12
ABCA4P78363 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.77■□□□□ 0.12
ABCA4P78363 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.77■□□□□ 0.12
ABCA4P78363 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.77■□□□□ 0.12
ABCA4P78363 RN7SL606P-201ENST00000472779 293 ntBASIC15.77■□□□□ 0.12
ABCA4P78363 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.77■□□□□ 0.12
ABCA4P78363 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ABCA4P78363 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.77■□□□□ 0.12
ABCA4P78363 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.77■□□□□ 0.12
ABCA4P78363 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ABCA4P78363 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
ABCA4P78363 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ABCA4P78363 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms