Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 PP12613-201ENST00000424958 2230 ntBASIC13.01□□□□□ -0.33
RPL39P62891 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 AC124067.4-201ENST00000519691 2379 ntBASIC13.01□□□□□ -0.33
RPL39P62891 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.01□□□□□ -0.33
RPL39P62891 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.01□□□□□ -0.33
RPL39P62891 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
RPL39P62891 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 PNMA6B-201ENST00000538162 1200 ntBASIC13.01□□□□□ -0.33
RPL39P62891 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.01□□□□□ -0.33
RPL39P62891 FLJ13224-201ENST00000313737 1514 ntBASIC13.01□□□□□ -0.33
RPL39P62891 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RPL39P62891 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RPL39P62891 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RPL39P62891 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
RPL39P62891 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 MIR663A-201ENST00000385250 93 ntBASIC13□□□□□ -0.33
RPL39P62891 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 OR2A1-AS1-207ENST00000486094 819 ntBASIC13□□□□□ -0.33
RPL39P62891 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13□□□□□ -0.33
RPL39P62891 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 HLA-B-256ENST00000639848 1089 ntBASIC13□□□□□ -0.33
RPL39P62891 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RPL39P62891 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13□□□□□ -0.33
RPL39P62891 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RPL39P62891 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13□□□□□ -0.33
RPL39P62891 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RPL39P62891 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
RPL39P62891 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 TNRC18P3-201ENST00000441896 2691 ntBASIC12.99□□□□□ -0.33
RPL39P62891 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RPL39P62891 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms