Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4XP62701 AC104076.2-201ENST00000448912 469 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 TSPY17P-201ENST00000450329 467 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 AP003041.3-201ENST00000527151 707 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.6■□□□□ 0.25
RPS4XP62701 AL353719.1-201ENST00000566847 864 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 WWOX-216ENST00000569818 525 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.6■□□□□ 0.25
RPS4XP62701 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RPS4XP62701 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 KRT8P7-201ENST00000533003 1432 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 AC092338.2-201ENST00000568827 1415 ntBASIC16.6■□□□□ 0.25
RPS4XP62701 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RPS4XP62701 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4XP62701 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4XP62701 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.59■□□□□ 0.25
RPS4XP62701 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RPS4XP62701 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.59■□□□□ 0.25
RPS4XP62701 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.59■□□□□ 0.25
RPS4XP62701 LINC01238-205ENST00000567549 1107 ntBASIC16.59■□□□□ 0.25
RPS4XP62701 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.59■□□□□ 0.25
RPS4XP62701 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RPS4XP62701 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 LETM1P2-201ENST00000597330 2178 ntBASIC16.59■□□□□ 0.25
RPS4XP62701 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.59■□□□□ 0.25
RPS4XP62701 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RPS4XP62701 AC138028.4-201ENST00000564984 1845 ntBASIC16.59■□□□□ 0.25
RPS4XP62701 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.58■□□□□ 0.25
RPS4XP62701 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RPS4XP62701 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPS4XP62701 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPS4XP62701 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
RPS4XP62701 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RPS4XP62701 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 HMGA1P5-201ENST00000412453 271 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.58■□□□□ 0.24
RPS4XP62701 CCR12P-201ENST00000446203 998 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 AC116562.4-202ENST00000641738 218 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 AL163051.1-201ENST00000569214 1512 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 GMCL1P1-201ENST00000463439 1581 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 SDHAP2-201ENST00000455183 2001 ntBASIC16.58■□□□□ 0.24
RPS4XP62701 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RPS4XP62701 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RPS4XP62701 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
RPS4XP62701 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms