Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.3■□□□□ 0.68
USP46P62068 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.3■□□□□ 0.68
USP46P62068 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
USP46P62068 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.3■□□□□ 0.68
USP46P62068 KRT8P26-201ENST00000534154 1276 ntBASIC19.3■□□□□ 0.68
USP46P62068 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.3■□□□□ 0.68
USP46P62068 MIR3180-1-201ENST00000580374 94 ntBASIC19.3■□□□□ 0.68
USP46P62068 MIR3180-3-201ENST00000584616 94 ntBASIC19.3■□□□□ 0.68
USP46P62068 AC005332.3-201ENST00000589904 676 ntBASIC19.3■□□□□ 0.68
USP46P62068 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.3■□□□□ 0.68
USP46P62068 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.3■□□□□ 0.68
USP46P62068 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
USP46P62068 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.3■□□□□ 0.68
USP46P62068 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USP46P62068 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.29■□□□□ 0.68
USP46P62068 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 MYLKP1-201ENST00000509077 1580 ntBASIC19.29■□□□□ 0.68
USP46P62068 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP46P62068 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 AP003733.1-201ENST00000491725 852 ntBASIC19.29■□□□□ 0.68
USP46P62068 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.29■□□□□ 0.68
USP46P62068 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.29■□□□□ 0.68
USP46P62068 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.29■□□□□ 0.68
USP46P62068 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 LTB4R2-202ENST00000528054 3092 ntBASIC19.29■□□□□ 0.68
USP46P62068 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.29■□□□□ 0.68
USP46P62068 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP46P62068 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
USP46P62068 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
USP46P62068 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.28■□□□□ 0.68
USP46P62068 AC004408.2-201ENST00000623613 2777 ntBASIC19.28■□□□□ 0.68
USP46P62068 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 AP000974.1-201ENST00000623909 2387 ntBASIC19.28■□□□□ 0.68
USP46P62068 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP46P62068 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USP46P62068 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP46P62068 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP46P62068 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.28■□□□□ 0.68
USP46P62068 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.28■□□□□ 0.68
USP46P62068 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.28■□□□□ 0.68
USP46P62068 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP46P62068 AC024563.2-201ENST00000603282 481 ntBASIC19.28■□□□□ 0.68
USP46P62068 AL390719.2-201ENST00000606993 987 ntBASIC19.28■□□□□ 0.68
USP46P62068 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.28■□□□□ 0.68
USP46P62068 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.28■□□□□ 0.68
USP46P62068 ANO7L1-203ENST00000602586 1720 ntBASIC19.28■□□□□ 0.68
USP46P62068 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP46P62068 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
USP46P62068 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
USP46P62068 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP46P62068 KRT18P48-201ENST00000434763 852 ntBASIC19.27■□□□□ 0.68
USP46P62068 DUSP5P1-201ENST00000441325 1139 ntBASIC19.27■□□□□ 0.68
USP46P62068 AC009065.1-201ENST00000564055 1225 ntBASIC19.27■□□□□ 0.68
USP46P62068 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.27■□□□□ 0.68
USP46P62068 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.27■□□□□ 0.68
USP46P62068 CLEC4GP1-201ENST00000596555 870 ntBASIC19.27■□□□□ 0.68
USP46P62068 AC012313.10-201ENST00000623509 926 ntBASIC19.27■□□□□ 0.68
USP46P62068 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms