Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 AC020763.4-201ENST00000623414 4170 ntBASIC18.12■□□□□ 0.49
SRP54P61011 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.12■□□□□ 0.49
SRP54P61011 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 AL163051.1-201ENST00000569214 1512 ntBASIC18.12■□□□□ 0.49
SRP54P61011 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SRP54P61011 MIR3652-201ENST00000579335 131 ntBASIC18.11■□□□□ 0.49
SRP54P61011 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.11■□□□□ 0.49
SRP54P61011 KRT18P1-202ENST00000452408 1331 ntBASIC18.11■□□□□ 0.49
SRP54P61011 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP54P61011 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SRP54P61011 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP54P61011 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SRP54P61011 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SRP54P61011 AL450487.1-201ENST00000426799 995 ntBASIC18.1■□□□□ 0.49
SRP54P61011 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.1■□□□□ 0.49
SRP54P61011 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 AL390719.2-201ENST00000606993 987 ntBASIC18.1■□□□□ 0.49
SRP54P61011 AC012313.10-201ENST00000623509 926 ntBASIC18.1■□□□□ 0.49
SRP54P61011 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP54P61011 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.1■□□□□ 0.49
SRP54P61011 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SRP54P61011 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP54P61011 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SRP54P61011 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SRP54P61011 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRP54P61011 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.09■□□□□ 0.49
SRP54P61011 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.09■□□□□ 0.49
SRP54P61011 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.09■□□□□ 0.49
SRP54P61011 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.09■□□□□ 0.49
SRP54P61011 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms