Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN8P56748 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN8P56748 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN8P56748 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 BCL2-203ENST00000589955 5011 ntBASIC17.49■□□□□ 0.39
CLDN8P56748 KRT8P7-201ENST00000533003 1432 ntBASIC17.49■□□□□ 0.39
CLDN8P56748 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN8P56748 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN8P56748 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 AL158047.1-201ENST00000445918 881 ntBASIC17.49■□□□□ 0.39
CLDN8P56748 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN8P56748 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN8P56748 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 AC090340.1-201ENST00000620778 4980 ntBASIC17.49■□□□□ 0.39
CLDN8P56748 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN8P56748 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN8P56748 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN8P56748 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN8P56748 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN8P56748 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 AC026471.5-201ENST00000615068 467 ntBASIC17.48■□□□□ 0.39
CLDN8P56748 AL023803.3-201ENST00000615559 522 ntBASIC17.48■□□□□ 0.39
CLDN8P56748 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN8P56748 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN8P56748 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN8P56748 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN8P56748 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN8P56748 AC138932.1-201ENST00000534164 6830 ntBASIC17.47■□□□□ 0.39
CLDN8P56748 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN8P56748 LINC00896-202ENST00000609602 2128 ntBASIC17.47■□□□□ 0.39
CLDN8P56748 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN8P56748 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN8P56748 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN8P56748 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN8P56748 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN8P56748 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms