Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH15P55291 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH15P55291 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH15P55291 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH15P55291 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDH15P55291 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH15P55291 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH15P55291 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH15P55291 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH15P55291 AP003097.1-201ENST00000530657 1135 ntBASIC17.15■□□□□ 0.34
CDH15P55291 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH15P55291 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.15■□□□□ 0.34
CDH15P55291 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDH15P55291 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH15P55291 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH15P55291 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.14■□□□□ 0.34
CDH15P55291 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CDH15P55291 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH15P55291 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH15P55291 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH15P55291 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.14■□□□□ 0.33
CDH15P55291 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH15P55291 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH15P55291 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDH15P55291 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH15P55291 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH15P55291 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH15P55291 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH15P55291 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH15P55291 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
CDH15P55291 AC142381.4-202ENST00000563973 229 ntBASIC17.13■□□□□ 0.33
CDH15P55291 C2orf69P4-201ENST00000565394 541 ntBASIC17.13■□□□□ 0.33
CDH15P55291 AC060766.5-201ENST00000590539 871 ntBASIC17.13■□□□□ 0.33
CDH15P55291 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH15P55291 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH15P55291 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH15P55291 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 PCDH8P1-201ENST00000428983 2773 ntBASIC17.12■□□□□ 0.33
CDH15P55291 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms